The x and y span lengths for a cylinder (or any panel actually) depend on the material direction of the cylinder.
On the buckling tab, you will see four buttons, indicating whether the curvature is in the X or Y direction and whether the stiffeners are inside or outside that curvature. If the curvature is in the Y direction (this is the default), then the X span is the barrel height, and the y span is the circumference. If the curvature is in the X direction, then the x span is the circumference and the y span is the barrel height.
If your material direction (i.e. your stiffeners) are running in the circumferential direction, make sure you pick the proper selection on these buttons.
For a complex double curvature, such as a dome, HyperSizer will still approximate the buckling solution as a cylinder. In other words, it doesn't really have a buckling method specific to analyzing a dome. In the past, we have started with buckling length of about 1/4 or 1/8 the circumference of the dome for the buckling length. Set the X and Y span to be the same. I don’t think I would recommend using full cylinder for a full dome (sphere).
This will get you in the ball-park, however, in this case we recommend analyzing the final sized dome using an FEA Eigenvalue buckling solution as a check because our method is still treating the dome as a cylinder.
Also, in our experience dome buckling requires a relatively large buckling knockdown. This is not specific to HyperSizer but to buckling methods in general. We have seen knockdowns for dome buckling, especially for thin shell domes, as low as 0.16. There is a NASA document that talks about buckling of thin dome shells. That document is "NASA-SP-8032, Buckling of Thin Walled Doubly Curved Shells".
Finally, we created a PPT presentation that describes how we recently used HyperSizer and HyperFEA to size a spherical dome common bulkhead for the NASA CLV Upper Stage including the effects of spherical panel buckling. Download the presentation
here.